The meeting will take place in Room 201, from 8:30 to 18:30. Coffee breaks in Hall C Pre-function area, and lunch in Hall C.
The tentative schedule of the day is here.
The meeting is organized by the BioPathways Consortium, which aims at fostering computational approaches to the modeling, reconstruction, analysis, simulation and application of biological networks.
SIG Registrants are not required to register as delegates for the ISMB 2010 conference to attend this SIG meeting.
Below is a list of our speakers with abstracts.
We look forward to seeing you in Boston! The organisers.
Randy Rettberg (MIT) - IGEM and the Registry of Standard Biological Parts
James Faeder (University of Pittsburgh) - Rule-Based Modeling of Biochemical Systems with BioNetGen
Eric Deeds (Harvard Medical School) - Competitive Self-assembly
Bud Mishra (NYU, Courant Institute) - Where Biology meets Computing
Sumit Jha (CMU) - Parameter Synthesis for Stochastic Biochemical Models from High Level Behavioral Specifications - abstract
Will Chen (Harvard Medical School) - Experimentation and Parameterization of Models
Eric Neumann (Clinical Semantics Group) - Accessing and Visualizing BioPax using the BBN S*QL CytoScape Plug-In: A Linked Data Approach
The Reactome Revolutions
Robin Haw - OICR - www.reactome.org
An Evaluation of the BioPAX Ontology from Level 2 to Level 3
Emek Demir - MSKCC - www.biopax.org
Pathway Tools version 14.0
Suzanne Paley, Mario Latendresse, Peter Karp - SRI - biocyc.org
Semantic Identification of Pathway Genes for the DOE Systems Biology Knowledgebase
Cliff Joslyn - Pacific Northwest National Laboratory
Pathway-based analysis of genome-wide siRNA screens identifies the regulatory landscape of APP processing - abstract
Luiz Miguel Camargo - Merck
The Translational Medicine Ontology: Driving personalized medicine by bridging the gap from bedside to bench - abstract
Michel Dumontier -
Carleton University, Ottawa
Human Metabolic Network Analysis - abstract
Livnat Jerby - Tel-Aviv University